bioconductor-rsamtools

downloads

This package provides an interface to the ‘samtools’, ‘bcftools’, and ‘tabix’ utilities (see ‘LICENCE’) for manipulating SAM (Sequence Alignment / Map), FASTA, binary variant call (BCF) and compressed indexed tab-delimited (tabix) files.

Home http://bioconductor.org/packages/release/bioc/html/Rsamtools.html
Versions 1.22.0, 1.24.0, 1.26.1
License Artistic-2.0 | file LICENSE
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-rsamtools

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rsamtools

and update with:

conda update bioconductor-rsamtools

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-rsamtools.