recipe bioconductor-rsemmed

An interface to the Semantic MEDLINE database

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/rsemmed.html

License:

Artistic-2.0

Recipe:

/bioconductor-rsemmed/meta.yaml

A programmatic interface to the Semantic MEDLINE database. It provides functions for searching the database for concepts and finding paths between concepts. Path searching can also be tailored to user specifications, such as placing restrictions on concept types and the type of link between concepts. It also provides functions for summarizing and visualizing those paths.

package bioconductor-rsemmed

Versions:

1.8.0-0,  1.4.0-0,  1.2.0-0,  1.0.0-1,  1.0.0-0

Depends:

• r-base >=4.2,<4.3.0a0

• r-dplyr

• r-igraph

• r-magrittr

• r-stringr

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-rsemmed

and update with:

conda update bioconductor-rsemmed

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rsemmed:<tag>

(see bioconductor-rsemmed/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-rsemmed/README.html)