recipe bioconductor-rseqan

R SeqAn

Homepage

https://bioconductor.org/packages/3.11/bioc/html/RSeqAn.html

License

BSD_3_clause + file LICENSE

Recipe

/bioconductor-rseqan/meta.yaml

Headers and some wrapper functions from the SeqAn C++ library for ease of usage in R.

package bioconductor-rseqan

Versions

1.8.0-0,  1.6.0-0,  1.4.0-1,  1.4.0-0,  1.2.0-0

Depends

• libblas >=3.8.0,<4.0a0

• libgcc-ng >=7.3.0

• liblapack >=3.8.0,<3.9.0a0

• libstdcxx-ng >=7.3.0

• r-base >=4.0,<4.1.0a0

• r-rcpp

Required By

• bioconductor-qckitfastq

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rseqan

and update with:

conda update bioconductor-rseqan

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rseqan:<tag>

(see bioconductor-rseqan/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-rseqan/README.html)