recipe bioconductor-rsvsim

RSVSim: an R/Bioconductor package for the simulation of structural variations

Homepage:

https://bioconductor.org/packages/3.14/bioc/html/RSVSim.html

License:

LGPL-3

Recipe:

/bioconductor-rsvsim/meta.yaml

Links:

biotools: rsvsim, doi: 10.1093/bioinformatics/btt198

RSVSim is a package for the simulation of deletions, insertions, inversion, tandem-duplications and translocations of various sizes in any genome available as FASTA-file or BSgenome data package. SV breakpoints can be placed uniformly accross the whole genome, with a bias towards repeat regions and regions of high homology (for hg19) or at user-supplied coordinates.

package bioconductor-rsvsim

(downloads) docker_bioconductor-rsvsim

Versions:
1.34.0-01.32.0-01.30.0-11.30.0-01.28.0-01.26.0-01.24.0-11.22.0-01.20.0-0

1.34.0-01.32.0-01.30.0-11.30.0-01.28.0-01.26.0-01.24.0-11.22.0-01.20.0-01.18.0-01.16.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-rsvsim

and update with:

conda update bioconductor-rsvsim

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rsvsim:<tag>

(see bioconductor-rsvsim/tags for valid values for <tag>)

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