Package Recipe 'bioconductor-rtnduals'

recipe bioconductor-rtnduals

Analysis of co-regulation and inference of 'dual regulons'

Homepage:: https://bioconductor.org/packages/3.16/bioc/html/RTNduals.html
License:: Artistic-2.0
Recipe:: /bioconductor-rtnduals/meta.yaml

RTNduals is a tool that searches for possible co-regulatory loops between regulon pairs generated by the RTN package. It compares the shared targets in order to infer 'dual regulons', a new concept that tests whether regulators can co-operate or compete in influencing targets.

package bioconductor-rtnduals¶

Versions:

1.22.0-0, 1.18.0-0, 1.16.0-0, 1.14.1-0, 1.14.0-0, 1.12.0-0, 1.10.0-0, 1.8.1-0, 1.6.0-0

Depends:

bioconductor-rtn >=2.22.0,<2.23.0
r-base >=4.2,<4.3.0a0

Required By:

bioconductor-rtnsurvival

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-rtnduals

and update with:

conda update bioconductor-rtnduals

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rtnduals:<tag>

(see bioconductor-rtnduals/tags for valid values for <tag>)

Download stats¶

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-rtnduals/README.html)