recipe bioconductor-rtracklayer

R interface to genome annotation files and the UCSC genome browser

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/rtracklayer.html

License:

Artistic-2.0 + file LICENSE

Recipe:

/bioconductor-rtracklayer/meta.yaml

Links:

biotools: rtracklayer

Extensible framework for interacting with multiple genome browsers (currently UCSC built-in) and manipulating annotation tracks in various formats (currently GFF, BED, bedGraph, BED15, WIG, BigWig and 2bit built-in). The user may export/import tracks to/from the supported browsers, as well as query and modify the browser state, such as the current viewport.

package bioconductor-rtracklayer

(downloads) docker_bioconductor-rtracklayer

Versions:
1.58.0-2,  1.58.0-1,  1.54.0-4,  1.54.0-3,  1.54.0-2,  1.54.0-1,  1.54.0-0,  1.52.0-0,  1.50.0-2, 

1.58.0-2,  1.58.0-1,  1.54.0-4,  1.54.0-3,  1.54.0-2,  1.54.0-1,  1.54.0-0,  1.52.0-0,  1.50.0-2,  1.50.0-1,  1.50.0-0,  1.48.0-0,  1.46.0-0,  1.44.2-1,  1.44.2-0,  1.44.0-1,  1.42.1-1,  1.42.1-0,  1.40.6-0,  1.38.3-0,  1.38.0-0,  1.36.6-0,  1.34.2-1,  1.34.1-0,  1.32.2-1,  1.30.1-0,  1.30.0-1

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-rtracklayer

and update with:

conda update bioconductor-rtracklayer

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rtracklayer:<tag>

(see bioconductor-rtracklayer/tags for valid values for <tag>)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-rtracklayer/README.html)