Extensible framework for interacting with multiple genome browsers (currently UCSC built-in) and manipulating annotation tracks in various formats (currently GFF, BED, bedGraph, BED15, WIG, BigWig and 2bit built-in). The user may export/import tracks to/from the supported browsers, as well as query and modify the browser state, such as the current viewport.
|Versions||1.30.0, 1.30.1, 1.32.2, 1.34.1|
|License||Artistic-2.0 + file LICENSE|
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-rtracklayer
and update with:
conda update bioconductor-rtracklayer
A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-rtracklayer.