recipe bioconductor-ruvnormalize

RUV for normalization of expression array data

Homepage

https://bioconductor.org/packages/3.14/bioc/html/RUVnormalize.html

License

GPL-3

Recipe

/bioconductor-ruvnormalize/meta.yaml

Links

biotools: ruvnormalize

RUVnormalize is meant to remove unwanted variation from gene expression data when the factor of interest is not defined, e.g., to clean up a dataset for general use or to do any kind of unsupervised analysis.

package bioconductor-ruvnormalize

Versions

1.28.0-0,  1.26.0-0,  1.24.0-2,  1.24.0-0,  1.22.0-0,  1.20.0-1,  1.18.0-1,  1.16.0-0,  1.14.0-0, 

1.28.0-0,  1.26.0-0,  1.24.0-2,  1.24.0-0,  1.22.0-0,  1.20.0-1,  1.18.0-1,  1.16.0-0,  1.14.0-0,  1.12.0-0

Depends

• bioconductor-biobase >=2.54.0,<2.55.0

• bioconductor-ruvnormalizedata >=1.14.0,<1.15.0

• r-base >=4.1,<4.2.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-ruvnormalize

and update with:

conda update bioconductor-ruvnormalize

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-ruvnormalize:<tag>

(see bioconductor-ruvnormalize/tags for valid values for <tag>)

Download stats

Link to this page

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