recipe bioconductor-ruvnormalize

RUV for normalization of expression array data

Homepage

https://bioconductor.org/packages/3.11/bioc/html/RUVnormalize.html

License

GPL-3

Recipe

/bioconductor-ruvnormalize/meta.yaml

Links

biotools: ruvnormalize

RUVnormalize is meant to remove unwanted variation from gene expression data when the factor of interest is not defined, e.g., to clean up a dataset for general use or to do any kind of unsupervised analysis.

package bioconductor-ruvnormalize

Versions

1.22.0-0,  1.20.0-1,  1.18.0-1,  1.16.0-0,  1.14.0-0,  1.12.0-0

Depends

• bioconductor-biobase >=2.48.0,<2.49.0

• bioconductor-ruvnormalizedata >=1.8.0,<1.9.0

• r-base >=4.0,<4.1.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-ruvnormalize

and update with:

conda update bioconductor-ruvnormalize

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-ruvnormalize:<tag>

(see bioconductor-ruvnormalize/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-ruvnormalize/README.html)