recipe bioconductor-scatac.explorer

A Collection of Single-cell ATAC Sequencing Datasets and Corresponding Metadata

Homepage

https://bioconductor.org/packages/3.14/data/experiment/html/scATAC.Explorer.html

License

Artistic-2.0

Recipe

/bioconductor-scatac.explorer/meta.yaml

This package provides a tool to search and download a collection of publicly available single cell ATAC-seq datasets and their metadata. scATAC-Explorer aims to act as a single point of entry for users looking to study single cell ATAC-seq data. Users can quickly search available datasets using the metadata table and download datasets of interest for immediate analysis within R.

package bioconductor-scatac.explorer

(downloads) docker_bioconductor-scatac.explorer

Versions

1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-scatac.explorer

and update with:

conda update bioconductor-scatac.explorer

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-scatac.explorer:<tag>

(see bioconductor-scatac.explorer/tags for valid values for <tag>)

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