- recipe bioconductor-scatedata
Data for SCATE (Single-cell ATAC-seq Signal Extraction and Enhancement)
- Homepage:
https://bioconductor.org/packages/3.16/data/experiment/html/SCATEData.html
- License:
MIT + file LICENSE
- Recipe:
SCATEData is an ExperimentHub package for SCATE which is a software tool for extracting and enhancing the sparse and discrete Single-cell ATAC-seq Signal.
- package bioconductor-scatedata¶
-
- Versions:
1.8.0-0
,1.4.0-1
,1.4.0-0
,1.2.0-0
,1.0.0-1
,1.0.0-0
,0.99.6-0
- Depends:
bioconductor-data-packages
>=20221109
bioconductor-experimenthub
>=2.6.0,<2.7.0
bioconductor-genomicalignments
>=1.34.0,<1.35.0
bioconductor-genomicranges
>=1.50.0,<1.51.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-scatedata
and update with:
conda update bioconductor-scatedata
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-scatedata:<tag>
(see bioconductor-scatedata/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-scatedata/README.html)