recipe bioconductor-scatterhatch

Creates hatched patterns for scatterplots

Homepage:

https://bioconductor.org/packages/3.18/bioc/html/scatterHatch.html

License:

MIT + file LICENSE

Recipe:

/bioconductor-scatterhatch/meta.yaml

The objective of this package is to efficiently create scatterplots where groups can be distinguished by color and texture. Visualizations in computational biology tend to have many groups making it difficult to distinguish between groups solely on color. Thus, this package is useful for increasing the accessibility of scatterplot visualizations to those with visual impairments such as color blindness.

package bioconductor-scatterhatch

(downloads) docker_bioconductor-scatterhatch

versions:

1.8.0-0,  1.6.0-0,  1.4.0-0,  1.0.0-0

depends r-base:

>=4.3,<4.4.0a0

depends r-ggplot2:

depends r-plyr:

depends r-spatstat.geom:

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install bioconductor-scatterhatch

and update with::

   mamba update bioconductor-scatterhatch

To create a new environment, run:

mamba create --name myenvname bioconductor-scatterhatch

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/bioconductor-scatterhatch:<tag>

(see `bioconductor-scatterhatch/tags`_ for valid values for ``<tag>``)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-scatterhatch/README.html)