recipe bioconductor-scds

In single cell RNA sequencing (scRNA-seq) data combinations of cells are sometimes considered a single cell (doublets). The scds package provides methods to annotate doublets in scRNA-seq data computationally.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/scds.html

License

MIT + file LICENSE

Recipe

/bioconductor-scds/meta.yaml

package bioconductor-scds

(downloads) docker_bioconductor-scds

Versions

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-scds

and update with:

conda update bioconductor-scds

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-scds:<tag>

(see bioconductor-scds/tags for valid values for <tag>)

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-scds/README.html)