recipe bioconductor-scfeaturefilter

An R implementation of the correlation-based method developed in the Joshi laboratory to analyse and filter processed single-cell RNAseq data. It returns a filtered version of the data containing only genes expression values unaffected by systematic noise.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/scFeatureFilter.html

License

MIT + file LICENSE

Recipe

/bioconductor-scfeaturefilter/meta.yaml

package bioconductor-scfeaturefilter

(downloads) docker_bioconductor-scfeaturefilter

Versions

1.4.0-1, 1.4.0-0, 1.2.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-scfeaturefilter

and update with:

conda update bioconductor-scfeaturefilter

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-scfeaturefilter:<tag>

(see bioconductor-scfeaturefilter/tags for valid values for <tag>)