- recipe bioconductor-scp
Mass Spectrometry-Based Single-Cell Proteomics Data Analysis
- Homepage
- License
Artistic-2.0
- Recipe
Utility functions for manipulating, processing, and analyzing mass spectrometry-based single-cell proteomics (SCP) data. The package is an extension to the 'QFeatures' package designed for SCP applications.
- package bioconductor-scp¶
-
- Versions
1.4.0-0
,1.2.0-0
,1.0.0-1
,1.0.0-0
- Depends
bioconductor-mscoreutils
>=1.6.0,<1.7.0
bioconductor-multiassayexperiment
>=1.20.0,<1.21.0
bioconductor-qfeatures
>=1.4.0,<1.5.0
bioconductor-s4vectors
>=0.32.0,<0.33.0
bioconductor-singlecellexperiment
>=1.16.0,<1.17.0
bioconductor-summarizedexperiment
>=1.24.0,<1.25.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-scp
and update with:
conda update bioconductor-scp
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-scp:<tag>
(see bioconductor-scp/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-scp/README.html)