recipe bioconductor-sdams

Differential Abundant Analysis for Metabolomics and Proteomics Data

Homepage

https://bioconductor.org/packages/3.11/bioc/html/SDAMS.html

License

GPL

Recipe

/bioconductor-sdams/meta.yaml

This Package utilizes a Semi-parametric Differential Abundance analysis (SDA) method for metabolomics and proteomics data from mass spectrometry. SDA is able to robustly handle non-normally distributed data and provides a clear quantification of the effect size.

package bioconductor-sdams

Versions

1.8.0-0, 1.6.0-0, 1.4.0-1, 1.2.0-0

Depends

• bioconductor-qvalue >=2.20.0,<2.21.0

• bioconductor-summarizedexperiment >=1.18.0,<1.19.0

• r-base >=4.0,<4.1.0a0

• r-trust

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-sdams

and update with:

conda update bioconductor-sdams

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-sdams:<tag>

(see bioconductor-sdams/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-sdams/README.html)