- recipe bioconductor-sdams
Differential Abundant/Expression Analysis for Metabolomics, Proteomics and single-cell RNA sequencing Data
- Homepage:
- License:
GPL
- Recipe:
This Package utilizes a Semi-parametric Differential Abundance/expression analysis (SDA) method for metabolomics and proteomics data from mass spectrometry as well as single-cell RNA sequencing data. SDA is able to robustly handle non-normally distributed data and provides a clear quantification of the effect size.
- package bioconductor-sdams¶
-
- Versions:
1.18.0-0
,1.14.0-0
,1.12.0-0
,1.10.0-1
,1.10.0-0
,1.8.0-0
,1.6.0-0
,1.4.0-1
,1.2.0-0
- Depends:
bioconductor-qvalue
>=2.30.0,<2.31.0
bioconductor-summarizedexperiment
>=1.28.0,<1.29.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-sdams
and update with:
conda update bioconductor-sdams
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-sdams:<tag>
(see bioconductor-sdams/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-sdams/README.html)