- recipe bioconductor-sechm
sechm: Complex Heatmaps from a SummarizedExperiment
- Homepage
- License
GPL-3
- Recipe
sechm provides a simple interface between SummarizedExperiment objects and the ComplexHeatmap package. It enables plotting annotated heatmaps from SE objects, with easy access to rowData and colData columns, and implements a number of features to make the generation of heatmaps easier and more flexible. These functionalities used to be part of the SEtools package.
- package bioconductor-sechm¶
-
- Versions
1.2.0-0
,1.0.0-0
- Depends
bioconductor-complexheatmap
>=2.10.0,<2.11.0
bioconductor-s4vectors
>=0.32.0,<0.33.0
bioconductor-summarizedexperiment
>=1.24.0,<1.25.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-sechm
and update with:
conda update bioconductor-sechm
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-sechm:<tag>
(see bioconductor-sechm/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-sechm/README.html)