recipe bioconductor-seqarray

Data management of large-scale whole-genome sequence variant calls

Homepage:

https://bioconductor.org/packages/3.14/bioc/html/SeqArray.html

License:

GPL-3

Recipe:

/bioconductor-seqarray/meta.yaml

Data management of large-scale whole-genome sequencing variant calls with thousands of individuals: genotypic data (e.g., SNVs, indels and structural variation calls) and annotations in SeqArray GDS files are stored in an array-oriented and compressed manner, with efficient data access using the R programming language.

package bioconductor-seqarray

(downloads) docker_bioconductor-seqarray

Versions:
1.34.0-21.34.0-11.34.0-01.32.0-01.30.0-11.30.0-01.28.0-01.26.0-01.24.2-0

1.34.0-21.34.0-11.34.0-01.32.0-01.30.0-11.30.0-01.28.0-01.26.0-01.24.2-01.22.2-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-seqarray

and update with:

conda update bioconductor-seqarray

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-seqarray:<tag>

(see bioconductor-seqarray/tags for valid values for <tag>)

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