bioconductor-seqpattern

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Visualising oligonucleotide patterns and sequence motifs occurrences across a large set of sequences centred at a common reference point and sorted by a user defined feature.

Home http://bioconductor.org/packages/release/bioc/html/seqPattern.html
Versions 1.2.0, 1.4.0, 1.6.0
License GPL-3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-seqpattern

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-seqpattern

and update with:

conda update bioconductor-seqpattern

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-seqpattern.