recipe bioconductor-sigfuge

SigFuge

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/SigFuge.html

License:

GPL-3

Recipe:

/bioconductor-sigfuge/meta.yaml

Links:

biotools: sigfuge, doi: 10.1093/nar/gku521

Algorithm for testing significance of clustering in RNA-seq data.

package bioconductor-sigfuge

Versions:

1.36.0-0,  1.32.0-0,  1.30.0-0,  1.28.0-1,  1.28.0-0,  1.26.0-0,  1.24.0-0,  1.22.0-1,  1.20.0-0, 

1.36.0-0,  1.32.0-0,  1.30.0-0,  1.28.0-1,  1.28.0-0,  1.26.0-0,  1.24.0-0,  1.22.0-1,  1.20.0-0,  1.18.0-0,  1.16.0-0

Depends:

• bioconductor-genomicranges >=1.50.0,<1.51.0

• r-base >=4.2,<4.3.0a0

• r-ggplot2

• r-matlab

• r-reshape

• r-sigclust

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-sigfuge

and update with:

conda update bioconductor-sigfuge

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-sigfuge:<tag>

(see bioconductor-sigfuge/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-sigfuge/README.html)