- recipe bioconductor-simplifyenrichment
Simplify Functional Enrichment Results
- Homepage
https://bioconductor.org/packages/3.14/bioc/html/simplifyEnrichment.html
- License
MIT + file LICENSE
- Recipe
A new clustering algorithm, binary cut, for clustering similarity matrices of functional terms is implemeted in this package. It also provideds functionalities for visualizing, summarizing and comparing the clusterings.
- package bioconductor-simplifyenrichment¶
-
- Versions
1.4.0-0
,1.2.0-0
,1.0.0-1
,1.0.0-0
- Depends
bioconductor-annotationdbi
>=1.56.0,<1.57.0
bioconductor-biocgenerics
>=0.40.0,<0.41.0
bioconductor-complexheatmap
>=2.10.0,<2.11.0
bioconductor-go.db
>=3.14.0,<3.15.0
bioconductor-gosemsim
>=2.20.0,<2.21.0
bioconductor-org.hs.eg.db
>=3.14.0,<3.15.0
r-base
>=4.1,<4.2.0a0
r-cluster
>=1.14.2
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-simplifyenrichment
and update with:
conda update bioconductor-simplifyenrichment
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-simplifyenrichment:<tag>
(see bioconductor-simplifyenrichment/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-simplifyenrichment/README.html)