recipe bioconductor-singlecellexperiment

Defines a S4 class for storing data from single-cell experiments. This includes specialized methods to store and retrieve spike-in information, dimensionality reduction coordinates and size factors for each cell, along with the usual metadata for genes and libraries.

Homepage

https://bioconductor.org/packages/3.8/bioc/html/SingleCellExperiment.html

License

GPL-3

Recipe

/bioconductor-singlecellexperiment/meta.yaml

package bioconductor-singlecellexperiment

(downloads) docker_bioconductor-singlecellexperiment

Versions

1.4.0-0, 1.2.0-0, 1.0.0-1, 1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-singlecellexperiment

and update with:

conda update bioconductor-singlecellexperiment

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-singlecellexperiment:<tag>

(see bioconductor-singlecellexperiment/tags for valid values for <tag>)