- recipe bioconductor-snagee
Signal-to-Noise applied to Gene Expression Experiments
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/SNAGEE.html
- License:
Artistic-2.0
- Recipe:
- Links:
biotools: snagee, doi: 10.1371/journal.pone.0051013
Signal-to-Noise applied to Gene Expression Experiments. Signal-to-noise ratios can be used as a proxy for quality of gene expression studies and samples. The SNRs can be calculated on any gene expression data set as long as gene IDs are available, no access to the raw data files is necessary. This allows to flag problematic studies and samples in any public data set.
- package bioconductor-snagee¶
-
- Versions:
1.38.0-0
,1.34.0-0
,1.32.0-0
,1.30.0-2
,1.30.0-0
,1.28.0-0
,1.26.0-1
,1.24.0-1
,1.24.0-0
,1.38.0-0
,1.34.0-0
,1.32.0-0
,1.30.0-2
,1.30.0-0
,1.28.0-0
,1.26.0-1
,1.24.0-1
,1.24.0-0
,1.22.0-0
,1.20.0-0
,1.18.0-0
- Depends:
bioconductor-snageedata
>=1.33.0,<1.34.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-snagee
and update with:
conda update bioconductor-snagee
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-snagee:<tag>
(see bioconductor-snagee/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-snagee/README.html)