recipe bioconductor-snifter

R wrapper for the python openTSNE library

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/snifter.html

License:

GPL-3

Recipe:

/bioconductor-snifter/meta.yaml

Provides an R wrapper for the implementation of FI-tSNE from the python package openTNSE. See Poličar et al. (2019) <doi:10.1101/731877> and the algorithm described by Linderman et al. (2018) <doi:10.1038/s41592-018-0308-4>.

package bioconductor-snifter

Versions:

1.8.0-0,  1.4.0-0,  1.2.0-0,  1.0.0-1,  1.0.0-0

Depends:

• bioconductor-basilisk >=1.9.0,<1.10.0

• r-assertthat

• r-base >=4.2,<4.3.0a0

• r-irlba

• r-reticulate

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-snifter

and update with:

conda update bioconductor-snifter

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-snifter:<tag>

(see bioconductor-snifter/tags for valid values for <tag>)

Download stats

Link to this page

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