recipe bioconductor-snplocs.hsapiens.dbsnp144.grch38

SNP locations and alleles for Homo sapiens extracted from NCBI dbSNP Build 144. The source data files used for this package were created by NCBI on May 30, 2015, and contain SNPs mapped to reference genome GRCh38.p2 (a patched version of GRCh38 that doesn’t alter chromosomes 1-22, X, Y, MT). Note that these SNPs can be “injected” in BSgenome.Hsapiens.NCBI.GRCh38 or in BSgenome.Hsapiens.UCSC.hg38.

Homepage

https://bioconductor.org/packages/3.9/data/annotation/html/SNPlocs.Hsapiens.dbSNP144.GRCh38.html

License

Artistic-2.0

Recipe

/bioconductor-snplocs.hsapiens.dbsnp144.grch38/meta.yaml

package bioconductor-snplocs.hsapiens.dbsnp144.grch38

(downloads) docker_bioconductor-snplocs.hsapiens.dbsnp144.grch38

Versions

0.99.20-4, 0.99.20-3, 0.99.20-1, 0.99.20-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-snplocs.hsapiens.dbsnp144.grch38

and update with:

conda update bioconductor-snplocs.hsapiens.dbsnp144.grch38

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-snplocs.hsapiens.dbsnp144.grch38:<tag>

(see bioconductor-snplocs.hsapiens.dbsnp144.grch38/tags for valid values for <tag>)