-
recipe
bioconductor-snpstats
SnpMatrix and XSnpMatrix classes and methods
- Homepage
https://bioconductor.org/packages/3.12/bioc/html/snpStats.html
- License
GPL-3
- Recipe
- Links
biotools: snpstats, doi: 10.1038/nmeth.3252
Classes and statistical methods for large SNP association studies. This extends the earlier snpMatrix package, allowing for uncertainty in genotypes.
-
package
bioconductor-snpstats
¶ -
- Versions
1.40.0-0
,1.38.0-0
,1.36.0-0
,1.34.0-1
,1.32.0-0
,1.30.0-0
,1.28.0-1
,1.28.0-0
,1.26.0-0
- Depends
bioconductor-biocgenerics
>=0.36.0,<0.37.0
bioconductor-zlibbioc
>=1.36.0,<1.37.0
libblas
>=3.8.0,<4.0a0
libgcc-ng
>=7.5.0
liblapack
>=3.8.0,<4.0a0
r-base
>=4.0,<4.1.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-snpstats
and update with:
conda update bioconductor-snpstats
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-snpstats:<tag>
(see bioconductor-snpstats/tags for valid values for
<tag>
)
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-snpstats/README.html)