- recipe bioconductor-snpstats
SnpMatrix and XSnpMatrix classes and methods
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/snpStats.html
- License:
GPL-3
- Recipe:
- Links:
biotools: snpstats, doi: 10.1038/nmeth.3252
Classes and statistical methods for large SNP association studies. This extends the earlier snpMatrix package, allowing for uncertainty in genotypes.
- package bioconductor-snpstats¶
-
- Versions:
1.48.0-0
,1.44.0-2
,1.44.0-1
,1.44.0-0
,1.42.0-0
,1.40.0-1
,1.40.0-0
,1.38.0-0
,1.36.0-0
,1.48.0-0
,1.44.0-2
,1.44.0-1
,1.44.0-0
,1.42.0-0
,1.40.0-1
,1.40.0-0
,1.38.0-0
,1.36.0-0
,1.34.0-1
,1.32.0-0
,1.30.0-0
,1.28.0-1
,1.28.0-0
,1.26.0-0
- Depends:
bioconductor-biocgenerics
>=0.44.0,<0.45.0
bioconductor-zlibbioc
>=1.44.0,<1.45.0
libblas
>=3.9.0,<4.0a0
libgcc-ng
>=12
liblapack
>=3.9.0,<4.0a0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-snpstats
and update with:
conda update bioconductor-snpstats
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-snpstats:<tag>
(see bioconductor-snpstats/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-snpstats/README.html)