recipe bioconductor-specl

provides a function for generating spectra libraries which can be used for MRM SRM MS workflows in proteomics. The package provides a BiblioSpec reader, a function which can add the protein information using a FASTA formatted amino acid file, and an export method for using the created library in the Spectronaut software.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/specL.html

License

GPL-3

Recipe

/bioconductor-specl/meta.yaml

Links

biotools: specl

package bioconductor-specl

(downloads) docker_bioconductor-specl

Versions

1.18.0-1, 1.16.1-0, 1.14.0-0, 1.12.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-specl

and update with:

conda update bioconductor-specl

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-specl:<tag>

(see bioconductor-specl/tags for valid values for <tag>)