recipe bioconductor-splots

Visualization of high-throughput assays in microtitre plate or slide format







biotools: splots, doi: 10.1038/nmeth.3252

This package is here to support legacy usages of it, but it should not be used for new code development. It provides a single function, plotScreen, for visualising data in microtitre plate or slide format. As a better alternative for such functionality, please consider the platetools package on CRAN ( and, or ggplot2 (geom_raster, facet_wrap) as exemplified in the vignette of this package.

package bioconductor-splots

(downloads) docker_bioconductor-splots



depends r-base:


depends r-rcolorbrewer:



You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install bioconductor-splots

and update with::

   mamba update bioconductor-splots

To create a new environment, run:

mamba create --name myenvname bioconductor-splots

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull<tag>

(see `bioconductor-splots/tags`_ for valid values for ``<tag>``)

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