recipe bioconductor-spqn

Spatial quantile normalization

Homepage

https://bioconductor.org/packages/3.11/bioc/html/spqn.html

License

Artistic-2.0

Recipe

/bioconductor-spqn/meta.yaml

The spqn package implements spatial quantile normalization (SpQN). This method was developed to remove a mean-correlation relationship in correlation matrices built from gene expression data. It can serve as pre-processing step prior to a co-expression analysis.

package bioconductor-spqn

(downloads) docker_bioconductor-spqn

Versions

1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-spqn

and update with:

conda update bioconductor-spqn

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-spqn:<tag>

(see bioconductor-spqn/tags for valid values for <tag>)