- recipe bioconductor-statial
A package to identify changes in cell state relative to spatial associations
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/Statial.html
- License:
GPL-3
- Recipe:
Statial is a suite of functions for identifying changes in cell state. The functionality provided by Statial provides robust quantification of cell type localisation which are invariant to changes in tissue structure. In addition to this Statial uncovers changes in marker expression associated with varying levels of localisation. These features can be used to explore how the structure and function of different cell types may be altered by the agents they are surrounded with.
- package bioconductor-statial¶
-
- Versions:
1.0.0-0
- Depends:
bioconductor-biocparallel
>=1.32.0,<1.33.0
bioconductor-singlecellexperiment
>=1.20.0,<1.21.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-statial
and update with:
conda update bioconductor-statial
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-statial:<tag>
(see bioconductor-statial/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-statial/README.html)