recipe bioconductor-subseq

Subsampling of high throughput sequencing count data for use in experiment design and analysis.

Homepage:https://bioconductor.org/packages/3.8/bioc/html/subSeq.html License:MIT + file LICENSE Recipe:/bioconductor-subseq/meta.yaml Links:biotools: subseq, doi: 10.1093/bioinformatics/btu552

package bioconductor-subseq

Versions:

1.12.0-0, 1.10.0-0, 1.8.0-0, 1.6.0-0

Depends:

• bioconductor-biobase >=2.42.0,<2.43.0
• bioconductor-qvalue >=2.14.0,<2.15.0
• r-base >=3.5.1,<3.5.2.0a0
• r-data.table
• r-digest
• r-dplyr
• r-ggplot2
• r-magrittr
• r-tidyr

Required By:

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-subseq

and update with:

conda update bioconductor-subseq

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-subseq:<tag>

(see bioconductor-subseq/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-subseq/README.html)