- recipe bioconductor-switchde
Switch-like differential expression across single-cell trajectories
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/switchde.html
- License:
GPL (>= 2)
- Recipe:
- Links:
biotools: switchde, doi: 10.1093/bioinformatics/btw798
Inference and detection of switch-like differential expression across single-cell RNA-seq trajectories.
- package bioconductor-switchde¶
-
- Versions:
1.24.0-0
,1.20.0-0
,1.18.0-0
,1.16.0-1
,1.16.0-0
,1.14.0-0
,1.12.0-0
,1.10.0-1
,1.8.0-0
,1.24.0-0
,1.20.0-0
,1.18.0-0
,1.16.0-1
,1.16.0-0
,1.14.0-0
,1.12.0-0
,1.10.0-1
,1.8.0-0
,1.6.0-0
,1.4.0-0
,1.2.0-0
- Depends:
bioconductor-singlecellexperiment
>=1.20.0,<1.21.0
bioconductor-summarizedexperiment
>=1.28.0,<1.29.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-switchde
and update with:
conda update bioconductor-switchde
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-switchde:<tag>
(see bioconductor-switchde/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-switchde/README.html)