- recipe bioconductor-synaptome.db
Synamptosome Proteome Database
- Homepage
https://bioconductor.org/packages/3.14/data/annotation/html/synaptome.db.html
- License
Artistic-2.0
- Recipe
The package contains local copy of the Synaptic proteome database. On top of this it provide a set of utility R functions to query and analyse its content. It allows extraction of information for specific genes and building the protein-protein interaction graph for gene sets, synaptic compartments, and brain regions.
- package bioconductor-synaptome.db¶
-
- Versions
0.99.8-0
- Depends
bioconductor-annotationhub
>=3.2.0,<3.3.0
bioconductor-synaptome.data
>=0.99.0,<0.100.0
curl
>=7.79.1,<8.0a0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-synaptome.db
and update with:
conda update bioconductor-synaptome.db
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-synaptome.db:<tag>
(see bioconductor-synaptome.db/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-synaptome.db/README.html)