- recipe bioconductor-tartare
Raw ground spectra recorded on Thermo Fisher Scientific mass spectrometers
- Homepage
https://bioconductor.org/packages/3.14/data/experiment/html/tartare.html
- License
GPL-3
- Recipe
Provides raw files recorded on different Liquid Chromatography Mass Spectrometry (LC-MS) instruments. All included MS instruments are manufactured by Thermo Fisher Scientific and belong to the Orbitrap Tribrid or Q Exactive Orbitrap family of instruments. Despite their common origin and shared hardware components ,e.g., Orbitrap mass analyser, the above instruments tend to write data in different "dialects" in a shared binary file format (.raw). The intention behind tartare is to provide complex but slim real-world files that can be used to make code robust with respect to this diversity. In other words, it is intended for enhanced unit testing. The package is considered to be used with the rawrr package and the Spectra MsBackends.
- package bioconductor-tartare¶
-
- Versions
1.8.0-0
,1.6.0-0
,1.4.0-1
,1.4.0-0
,1.2.0-0
,0.99.14-1
- Depends
bioconductor-annotationhub
>=3.2.0,<3.3.0
bioconductor-experimenthub
>=2.2.0,<2.3.0
curl
>=7.79.1,<8.0a0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-tartare
and update with:
conda update bioconductor-tartare
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-tartare:<tag>
(see bioconductor-tartare/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-tartare/README.html)