- recipe bioconductor-tenxbusdata
Single cell dataset from 10x in BUS format
- Homepage
https://bioconductor.org/packages/3.14/data/experiment/html/TENxBUSData.html
- License
BSD_2_clause + file LICENSE
- Recipe
Download Barcode, UMI, and Set (BUS) format of 10x datasets from within R. This package accompanies the package BUSpaRse, which can load BUS format into R as a sparse matrix, and which has utility functions related to using the C++ command line package bustools.
- package bioconductor-tenxbusdata¶
-
- Versions
1.8.0-0
,1.6.0-0
,1.4.0-1
,1.4.0-0
,1.2.1-0
,1.0.0-0
- Depends
bioconductor-annotationhub
>=3.2.0,<3.3.0
bioconductor-biocgenerics
>=0.40.0,<0.41.0
bioconductor-experimenthub
>=2.2.0,<2.3.0
curl
>=7.79.1,<8.0a0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-tenxbusdata
and update with:
conda update bioconductor-tenxbusdata
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-tenxbusdata:<tag>
(see bioconductor-tenxbusdata/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-tenxbusdata/README.html)