recipe bioconductor-tfutils

TFutils

Homepage

https://bioconductor.org/packages/3.14/bioc/html/TFutils.html

License

Artistic-2.0

Recipe

/bioconductor-tfutils/meta.yaml

This package helps users to work with TF metadata from various sources. Significant catalogs of TFs and classifications thereof are made available. Tools for working with motif scans are also provided.

package bioconductor-tfutils

Versions

1.14.0-0,  1.12.0-0,  1.10.1-0,  1.10.0-0,  1.8.0-0,  1.6.0-0,  1.4.0-1,  1.4.0-0,  1.2.0-0

Depends

• bioconductor-annotationdbi >=1.56.0,<1.57.0

• bioconductor-biocfilecache >=2.2.0,<2.3.0

• bioconductor-gseabase >=1.56.0,<1.57.0

• bioconductor-org.hs.eg.db >=3.14.0,<3.15.0

• bioconductor-rsamtools >=2.10.0,<2.11.0

• r-base >=4.1,<4.2.0a0

• r-dplyr

• r-dt

• r-httr

• r-magrittr

• r-miniui

• r-readxl

• r-rjson

• r-shiny

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-tfutils

and update with:

conda update bioconductor-tfutils

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-tfutils:<tag>

(see bioconductor-tfutils/tags for valid values for <tag>)

Download stats

Link to this page

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