recipe bioconductor-tidysinglecellexperiment

Brings SingleCellExperiment to the Tidyverse

Homepage

https://bioconductor.org/packages/3.14/bioc/html/tidySingleCellExperiment.html

License

GPL-3

Recipe

/bioconductor-tidysinglecellexperiment/meta.yaml

tidySingleCellExperiment is an adapter that abstracts the 'SingleCellExperiment' container in the form of tibble and allows the data manipulation, plotting and nesting using 'tidyverse'

package bioconductor-tidysinglecellexperiment

Versions

1.4.0-0,  1.2.0-0,  1.0.0-1,  1.0.0-0

Depends

• bioconductor-s4vectors >=0.32.0,<0.33.0

• bioconductor-singlecellexperiment >=1.16.0,<1.17.0

• bioconductor-summarizedexperiment >=1.24.0,<1.25.0

• r-base >=4.1,<4.2.0a0

• r-cli

• r-dplyr

• r-ellipsis

• r-fansi

• r-ggplot2

• r-lifecycle

• r-magrittr

• r-pillar

• r-plotly

• r-purrr

• r-rlang

• r-stringr

• r-tibble

• r-tidyr

• r-tidyselect

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-tidysinglecellexperiment

and update with:

conda update bioconductor-tidysinglecellexperiment

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-tidysinglecellexperiment:<tag>

(see bioconductor-tidysinglecellexperiment/tags for valid values for <tag>)

Download stats

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