recipe bioconductor-tidysinglecellexperiment

Brings SingleCellExperiment to the Tidyverse

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/tidySingleCellExperiment.html

License:

GPL-3

Recipe:

/bioconductor-tidysinglecellexperiment/meta.yaml

tidySingleCellExperiment is an adapter that abstracts the 'SingleCellExperiment' container in the form of tibble and allows the data manipulation, plotting and nesting using 'tidyverse'

package bioconductor-tidysinglecellexperiment

Versions:

1.8.0-0,  1.4.0-0,  1.2.0-0,  1.0.0-1,  1.0.0-0

Depends:

• bioconductor-s4vectors >=0.36.0,<0.37.0

• bioconductor-singlecellexperiment >=1.20.0,<1.21.0

• bioconductor-summarizedexperiment >=1.28.0,<1.29.0

• r-base >=4.2,<4.3.0a0

• r-cli

• r-dplyr

• r-ellipsis

• r-fansi

• r-ggplot2

• r-lifecycle

• r-magrittr

• r-pillar

• r-plotly

• r-purrr

• r-rlang

• r-stringr

• r-tibble

• r-tidyr

• r-tidyselect

• r-ttservice

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-tidysinglecellexperiment

and update with:

conda update bioconductor-tidysinglecellexperiment

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-tidysinglecellexperiment:<tag>

(see bioconductor-tidysinglecellexperiment/tags for valid values for <tag>)

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