recipe bioconductor-tissuetreg

The package provides ready to use epigenomes (obtained from TWGBS) and transcriptomes (RNA-seq) from various tissues as obtained in the study (Delacher and Imbusch 2017, PMID: 28783152). Regulatory T cells (Treg cells) perform two distinct functions: they maintain self-tolerance, and they support organ homeostasis by differentiating into specialized tissue Treg cells. The underlying dataset characterises the epigenetic and transcriptomic modifications for specialized tissue Treg cells.

Homepage

https://bioconductor.org/packages/3.9/data/experiment/html/tissueTreg.html

License

GPL (>= 2)

Recipe

/bioconductor-tissuetreg/meta.yaml

package bioconductor-tissuetreg

(downloads) docker_bioconductor-tissuetreg

Versions

1.4.0-1, 1.4.0-0, 1.2.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-tissuetreg

and update with:

conda update bioconductor-tissuetreg

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-tissuetreg:<tag>

(see bioconductor-tissuetreg/tags for valid values for <tag>)