recipe bioconductor-toxicogx

Analysis of Large-Scale Toxico-Genomic Data

Homepage

https://bioconductor.org/packages/3.14/bioc/html/ToxicoGx.html

License

MIT + file LICENSE

Recipe

/bioconductor-toxicogx/meta.yaml

Contains a set of functions to perform large-scale analysis of toxicogenomic data, providing a standardized data structure to hold information relevant to annotation, visualization and statistical analysis of toxicogenomic data.

package bioconductor-toxicogx

Versions

1.4.0-0,  1.2.0-0,  1.0.1-0,  1.0.0-0

Depends

• bioconductor-biobase >=2.54.0,<2.55.0

• bioconductor-biocparallel >=1.28.0,<1.29.0

• bioconductor-coregx >=1.6.0,<1.7.0

• bioconductor-limma >=3.50.0,<3.51.0

• bioconductor-s4vectors >=0.32.0,<0.33.0

• bioconductor-summarizedexperiment >=1.24.0,<1.25.0

• r-assertthat

• r-base >=4.1,<4.2.0a0

• r-catools

• r-data.table

• r-downloader

• r-dplyr

• r-ggplot2

• r-jsonlite

• r-magrittr

• r-reshape2

• r-scales

• r-tibble

• r-tidyr

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-toxicogx

and update with:

conda update bioconductor-toxicogx

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-toxicogx:<tag>

(see bioconductor-toxicogx/tags for valid values for <tag>)

Download stats

Link to this page

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