recipe bioconductor-tracktables

Build IGV tracks and HTML reports

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/tracktables.html

License:

GPL (>= 3)

Recipe:

/bioconductor-tracktables/meta.yaml

Links:

biotools: tracktables, doi: 10.1038/nmeth.3252

Methods to create complex IGV genome browser sessions and dynamic IGV reports in HTML pages.

package bioconductor-tracktables

Versions:

1.32.0-0,  1.28.0-0,  1.26.0-0,  1.24.0-1,  1.24.0-0,  1.22.0-0,  1.20.0-0,  1.18.0-1,  1.16.0-0, 

1.32.0-0,  1.28.0-0,  1.26.0-0,  1.24.0-1,  1.24.0-0,  1.22.0-0,  1.20.0-0,  1.18.0-1,  1.16.0-0,  1.14.0-0,  1.12.0-0

Depends:

• bioconductor-genomicranges >=1.50.0,<1.51.0

• bioconductor-iranges >=2.32.0,<2.33.0

• bioconductor-rsamtools >=2.14.0,<2.15.0

• bioconductor-xvector >=0.38.0,<0.39.0

• r-base >=4.2,<4.3.0a0

• r-rcolorbrewer

• r-stringr

• r-tractor.base

• r-xml

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-tracktables

and update with:

conda update bioconductor-tracktables

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-tracktables:<tag>

(see bioconductor-tracktables/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-tracktables/README.html)