- recipe bioconductor-trajectoryutils
Single-Cell Trajectory Analysis Utilities
- Homepage
https://bioconductor.org/packages/3.14/bioc/html/TrajectoryUtils.html
- License
GPL-3
- Recipe
Implements low-level utilities for single-cell trajectory analysis, primarily intended for re-use inside higher-level packages. Include a function to create a cluster-level minimum spanning tree and data structures to hold pseudotime inference results.
- package bioconductor-trajectoryutils¶
-
- Versions
1.2.0-0
,1.0.0-0
- Depends
bioconductor-s4vectors
>=0.32.0,<0.33.0
bioconductor-singlecellexperiment
>=1.16.0,<1.17.0
bioconductor-summarizedexperiment
>=1.24.0,<1.25.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-trajectoryutils
and update with:
conda update bioconductor-trajectoryutils
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-trajectoryutils:<tag>
(see bioconductor-trajectoryutils/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-trajectoryutils/README.html)