- recipe bioconductor-traser
GWAS trait-associated SNP enrichment analyses in genomic intervals
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/traseR.html
- License:
GPL
- Recipe:
- Links:
biotools: traser, doi: 10.1093/bioinformatics/btv741
traseR performs GWAS trait-associated SNP enrichment analyses in genomic intervals using different hypothesis testing approaches, also provides various functionalities to explore and visualize the results.
- package bioconductor-traser¶
-
- Versions:
1.28.0-0
,1.24.0-0
,1.22.0-0
,1.20.0-1
,1.20.0-0
,1.18.0-0
,1.16.0-0
,1.14.0-1
,1.12.0-0
,1.28.0-0
,1.24.0-0
,1.22.0-0
,1.20.0-1
,1.20.0-0
,1.18.0-0
,1.16.0-0
,1.14.0-1
,1.12.0-0
,1.10.0-0
,1.8.0-0
,1.6.0-0
- Depends:
bioconductor-bsgenome.hsapiens.ucsc.hg19
>=1.4.0,<1.5.0
bioconductor-genomicranges
>=1.50.0,<1.51.0
bioconductor-iranges
>=2.32.0,<2.33.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-traser
and update with:
conda update bioconductor-traser
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-traser:<tag>
(see bioconductor-traser/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-traser/README.html)