- recipe bioconductor-tress
Toolbox for mRNA epigenetics sequencing analysis
- Homepage:
- License:
GPL-3 + file LICENSE
- Recipe:
This package is devoted to analyzing MeRIP-seq data. Current functionalities include 1. detection of transcriptome wide m6A methylation regions 2. detection of transcriptome wide differential m6A methylation regions.
- package bioconductor-tress¶
-
- Versions:
1.4.0-0
,1.0.0-0
- Depends:
bioconductor-annotationdbi
>=1.60.0,<1.61.0
bioconductor-genomicfeatures
>=1.50.0,<1.51.0
bioconductor-genomicranges
>=1.50.0,<1.51.0
bioconductor-iranges
>=2.32.0,<2.33.0
bioconductor-rsamtools
>=2.14.0,<2.15.0
bioconductor-rtracklayer
>=1.58.0,<1.59.0
bioconductor-s4vectors
>=0.36.0,<0.37.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-tress
and update with:
conda update bioconductor-tress
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-tress:<tag>
(see bioconductor-tress/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-tress/README.html)