- recipe bioconductor-ttmap
Two-Tier Mapper: a clustering tool based on topological data analysis
- Homepage
- License
GPL-2
- Recipe
TTMap is a clustering method that groups together samples with the same deviation in comparison to a control group. It is specially useful when the data is small. It is parameter free.
- package bioconductor-ttmap¶
-
- Versions
1.16.0-0
,1.14.0-0
,1.12.0-1
,1.12.0-0
,1.10.0-0
,1.8.0-0
,1.6.0-1
,1.4.0-0
- Depends
bioconductor-biobase
>=2.54.0,<2.55.0
bioconductor-summarizedexperiment
>=1.24.0,<1.25.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-ttmap
and update with:
conda update bioconductor-ttmap
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-ttmap:<tag>
(see bioconductor-ttmap/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-ttmap/README.html)