recipe bioconductor-tweedeseq

RNA-seq data analysis using the Poisson-Tweedie family of distributions

Homepage

https://bioconductor.org/packages/3.11/bioc/html/tweeDEseq.html

License

GPL (>= 2)

Recipe

/bioconductor-tweedeseq/meta.yaml

Links

biotools: tweedeseq

Differential expression analysis of RNA-seq using the Poisson-Tweedie family of distributions.

package bioconductor-tweedeseq

Versions

1.34.0-0,  1.32.0-0,  1.30.0-1,  1.30.0-0,  1.28.1-0,  1.28.0-0,  1.26.0-0,  1.24.0-0,  1.22.0-0

Depends

• bioconductor-cqn >=1.34.0,<1.35.0

• bioconductor-edger >=3.30.0,<3.31.0

• bioconductor-limma >=3.44.0,<3.45.0

• libblas >=3.8.0,<4.0a0

• libgcc-ng >=7.3.0

• liblapack >=3.8.0,<3.9.0a0

• r-base >=4.0,<4.1.0a0

• r-mass

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-tweedeseq

and update with:

conda update bioconductor-tweedeseq

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-tweedeseq:<tag>

(see bioconductor-tweedeseq/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-tweedeseq/README.html)