recipe bioconductor-txdb.dmelanogaster.ucsc.dm3.ensgene

Exposes an annotation databases generated from UCSC by exposing these as TxDb objects

Homepage

https://bioconductor.org/packages/3.9/data/annotation/html/TxDb.Dmelanogaster.UCSC.dm3.ensGene.html

License

Artistic-2.0

Recipe

/bioconductor-txdb.dmelanogaster.ucsc.dm3.ensgene/meta.yaml

package bioconductor-txdb.dmelanogaster.ucsc.dm3.ensgene

(downloads) docker_bioconductor-txdb.dmelanogaster.ucsc.dm3.ensgene

Versions

3.2.2-5, 3.2.2-4, 3.2.2-2, 3.2.2-1, 3.2.2-0

Depends bioconductor-annotationdbi

>=1.44.0,<1.45.0

Depends bioconductor-genomicfeatures

>=1.34.0,<1.35.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends wget

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-txdb.dmelanogaster.ucsc.dm3.ensgene

and update with:

conda update bioconductor-txdb.dmelanogaster.ucsc.dm3.ensgene

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-txdb.dmelanogaster.ucsc.dm3.ensgene:<tag>

(see bioconductor-txdb.dmelanogaster.ucsc.dm3.ensgene/tags for valid values for <tag>)