recipe bioconductor-tximportdata

tximportData

Homepage

https://bioconductor.org/packages/3.11/data/experiment/html/tximportData.html

License

GPL (>= 2)

Recipe

/bioconductor-tximportdata/meta.yaml

This package provides the output of running various transcript abundance quantifiers on a set of 6 RNA-seq samples from the GEUVADIS project. The quantifiers were Cufflinks, RSEM, kallisto, Salmon and Sailfish. For details on version numbers, sample information, and details on calls, see the package vignette.

package bioconductor-tximportdata

(downloads) docker_bioconductor-tximportdata

Versions

1.16.0-01.14.0-01.12.0-11.12.0-01.10.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-tximportdata

and update with:

conda update bioconductor-tximportdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-tximportdata:<tag>

(see bioconductor-tximportdata/tags for valid values for <tag>)