recipe bioconductor-webbioc

An integrated web interface for doing microarray analysis using several of the Bioconductor packages. It is intended to be deployed as a centralized bioinformatics resource for use by many users. (Currently only Affymetrix oligonucleotide analysis is supported.)

Homepage

https://bioconductor.org/packages/3.9/bioc/html/webbioc.html

License

GPL (>= 2)

Recipe

/bioconductor-webbioc/meta.yaml

Links

biotools: webbioc, doi: 10.1007/0-387-29362-0_18

package bioconductor-webbioc

Versions

1.56.0-1, 1.54.0-0, 1.52.0-0, 1.50.0-0

Depends

• bioconductor-affy >=1.62.0,<1.63.0

• bioconductor-annaffy >=1.56.0,<1.57.0

• bioconductor-biobase >=2.44.0,<2.45.0

• bioconductor-gcrma >=2.56.0,<2.57.0

• bioconductor-multtest >=2.40.0,<2.41.0

• bioconductor-qvalue >=2.16.0,<2.17.0

• bioconductor-vsn >=3.52.0,<3.53.0

• r-base >=3.6,<3.7.0a0

• r-biocmanager

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-webbioc

and update with:

conda update bioconductor-webbioc

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-webbioc:<tag>

(see bioconductor-webbioc/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-webbioc/README.html)