recipe bioconductor-webbioc

Bioconductor Web Interface

Homepage

https://bioconductor.org/packages/3.14/bioc/html/webbioc.html

License

GPL (>= 2)

Recipe

/bioconductor-webbioc/meta.yaml

Links

biotools: webbioc, doi: 10.1007/0-387-29362-0_18

An integrated web interface for doing microarray analysis using several of the Bioconductor packages. It is intended to be deployed as a centralized bioinformatics resource for use by many users. (Currently only Affymetrix oligonucleotide analysis is supported.)

package bioconductor-webbioc

Versions

1.66.0-0,  1.64.0-0,  1.62.0-1,  1.62.0-0,  1.60.0-0,  1.58.0-0,  1.56.0-1,  1.54.0-0,  1.52.0-0, 

1.66.0-0,  1.64.0-0,  1.62.0-1,  1.62.0-0,  1.60.0-0,  1.58.0-0,  1.56.0-1,  1.54.0-0,  1.52.0-0,  1.50.0-0

Depends

• bioconductor-affy >=1.72.0,<1.73.0

• bioconductor-annaffy >=1.66.0,<1.67.0

• bioconductor-biobase >=2.54.0,<2.55.0

• bioconductor-gcrma >=2.66.0,<2.67.0

• bioconductor-multtest >=2.50.0,<2.51.0

• bioconductor-qvalue >=2.26.0,<2.27.0

• bioconductor-vsn >=3.62.0,<3.63.0

• r-base >=4.1,<4.2.0a0

• r-biocmanager

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-webbioc

and update with:

conda update bioconductor-webbioc

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-webbioc:<tag>

(see bioconductor-webbioc/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-webbioc/README.html)