recipe bioconductor-zlibbioc

An R packaged zlib-1.2.5

Homepage

https://bioconductor.org/packages/3.14/bioc/html/zlibbioc.html

License

Artistic-2.0 + file LICENSE

Recipe

/bioconductor-zlibbioc/meta.yaml

Links

biotools: zlibbioc, doi: 10.1038/nmeth.3252

This package uses the source code of zlib-1.2.5 to create libraries for systems that do not have these available via other means (most Linux and Mac users should have system-level access to zlib, and no direct need for this package). See the vignette for instructions on use.

package bioconductor-zlibbioc

Versions

1.40.0-0,  1.38.0-0,  1.36.0-1,  1.36.0-0,  1.34.0-0,  1.32.0-0,  1.30.0-1,  1.30.0-0,  1.28.0-0, 

1.40.0-0,  1.38.0-0,  1.36.0-1,  1.36.0-0,  1.34.0-0,  1.32.0-0,  1.30.0-1,  1.30.0-0,  1.28.0-0,  1.26.0-0,  1.24.0-0,  1.22.0-0,  1.20.0-1,  1.20.0-0,  1.18.0-0,  1.16.0-1,  1.16.0-0,  1.14.0-0

Depends

• libblas >=3.8.0,<4.0a0

• libgcc-ng >=9.4.0

• liblapack >=3.8.0,<4.0a0

• r-base >=4.1,<4.2.0a0

Required By

• bioconductor-madseq

• bioconductor-methylkit

• bioconductor-scpipe

• bioconductor-norce

• bioconductor-rsamtools

• bioconductor-shortread

• bioconductor-nxtirfcore

• bioconductor-rhtslib

• bioconductor-mzr

• bioconductor-rtracklayer

• bioconductor-flames

• bioconductor-rfastp

• bioconductor-epialleler

• bioconductor-oligo

• bioconductor-affyplm

• bioconductor-nanomethviz

• bioconductor-diffhic

• bioconductor-snpstats

• bioconductor-bamsignals

• bioconductor-csaw

• bioconductor-transview

• bioconductor-affy

• bioconductor-maftools

• bioconductor-polyester

• bioconductor-variantannotation

• bioconductor-affyio

• bioconductor-seqtools

• bioconductor-ncdfflow

• bioconductor-qckitfastq

• bioconductor-makecdfenv

• bioconductor-xvector

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-zlibbioc

and update with:

conda update bioconductor-zlibbioc

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-zlibbioc:<tag>

(see bioconductor-zlibbioc/tags for valid values for <tag>)

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