- recipe bold-identification
A tool for taxonomic assignment for given sequences using the BOLD database (http://www.boldsystems.org/index.php)
- package bold-identification¶
While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.
Given that you already have a conda environment in which you want to have this package, install with:
mamba install bold-identification and update with:: mamba update bold-identification
To create a new environment, run:
mamba create --name myenvname bold-identification
myenvnamebeing a reasonable name for the environment (see e.g. the mamba docs for details and further options).
Alternatively, use the docker container:
docker pull quay.io/biocontainers/bold-identification:<tag> (see `bold-identification/tags`_ for valid values for ``<tag>``)