recipe breakdancer

SV detection from paired end reads mapping

Homepage:

https://github.com/genome/breakdancer

License:

GPLv3

Recipe:

/breakdancer/meta.yaml

Links:

biotools: breakdancer

package breakdancer

Versions:

1.4.5-10,  1.4.5-9,  1.4.5-8,  1.4.5-7,  1.4.5-6,  1.4.5-2,  1.4.5-1,  1.4.5-0

Depends:

• libgcc-ng >=10.3.0

• libstdcxx-ng >=10.3.0

• libzlib >=1.2.11,<1.3.0a0

• ncurses >=6.3,<7.0a0

• perl >=5.32.1,<5.33.0a0 *_perl5

• perl-gdgraph-histogram

• perl-math-cdf

• perl-statistics-descriptive

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install breakdancer

and update with:

conda update breakdancer

or use the docker container:

docker pull quay.io/biocontainers/breakdancer:<tag>

(see breakdancer/tags for valid values for <tag>)

Download stats

Link to this page

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