recipe breakdancer

SV detection from paired end reads mapping

Homepage

https://github.com/genome/breakdancer

License

GPLv3

Recipe

/breakdancer/meta.yaml

Links

biotools: breakdancer

package breakdancer

Versions

1.4.5-7,  1.4.5-6,  1.4.5-2,  1.4.5-1,  1.4.5-0

Depends

• libgcc-ng >=7.5.0

• libstdcxx-ng >=7.5.0

• perl-gdgraph-histogram

• perl-math-cdf

• perl-statistics-descriptive

• zlib >=1.2.11,<1.3.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install breakdancer

and update with:

conda update breakdancer

or use the docker container:

docker pull quay.io/biocontainers/breakdancer:<tag>

(see breakdancer/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/breakdancer/README.html)