breseq

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A computational pipeline for finding mutations relative to a reference sequence in short-read DNA re-sequencing data.

Home https://github.com/barricklab/breseq
Versions 0.29.0
License GPLv3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/breseq

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install breseq

and update with:

conda update breseq

docker

A Docker container is available at https://quay.io/repository/biocontainers/breseq.